Transcription profiling by high throughput sequencing of bundle sheath and leaf mesophyl from successive developmental stages of maize Mo17 inbred line
RNA-Seq mRNA baseline
Organism:
Zea mays
Publication
- Tausta SL, Li P, Si Y, Gandotra N, Liu P et al. (2014) Developmental dynamics of Kranz cell transcriptional specificity in maize leaf reveals early onset of C4-related processes.
Sample Characteristics
Experimental Variables
Analysed
Run
age
cultivar
developmental stage
genotype
organism
organism part
sampling site
organism part
sampling site
Yes
SRR1138391
9 day
Mo17
seedling
wild type genotype
Zea mays
bundle sheath
third leaf section 4
bundle sheath
third leaf section 4
Yes
SRR1138392
9 day
Mo17
seedling
wild type genotype
Zea mays
bundle sheath
third leaf section 4
bundle sheath
third leaf section 4
Yes
SRR1138393
9 day
Mo17
seedling
wild type genotype
Zea mays
leaf mesophyll
third leaf section 4
mesophyll
third leaf section 4
Yes
SRR1138394
9 day
Mo17
seedling
wild type genotype
Zea mays
leaf mesophyll
third leaf section 4
mesophyll
third leaf section 4
Yes
SRR1138395
9 day
Mo17
seedling
wild type genotype
Zea mays
bundle sheath
third leaf section 9
bundle sheath
third leaf section 9
Yes
SRR1138396
9 day
Mo17
seedling
wild type genotype
Zea mays
bundle sheath
third leaf section 9
bundle sheath
third leaf section 9
Yes
SRR1138397
9 day
Mo17
seedling
wild type genotype
Zea mays
leaf mesophyll
third leaf section 9
mesophyll
third leaf section 9
Yes
SRR1138398
9 day
Mo17
seedling
wild type genotype
Zea mays
leaf mesophyll
third leaf section 9
mesophyll
third leaf section 9
Yes
SRR1138399
9 day
Mo17
seedling
wild type genotype
Zea mays
bundle sheath
third leaf section 14
bundle sheath
third leaf section 14
Yes
SRR1138400
9 day
Mo17
seedling
wild type genotype
Zea mays
bundle sheath
third leaf section 14
bundle sheath
third leaf section 14
Yes
SRR1138401
9 day
Mo17
seedling
wild type genotype
Zea mays
leaf mesophyll
third leaf section 14
mesophyll
third leaf section 14
Yes
SRR1138402
9 day
Mo17
seedling
wild type genotype
Zea mays
leaf mesophyll
third leaf section 14
mesophyll
third leaf section 14
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